Phased-out permanents are treated as though they don't exist
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The days when a casual player could join a local FNM and compete on a $100 budget are hereby officially gone
Ideally you'd be putting this on something withy lifelink to keep the gains going, or even Qala, Ajani's Pridemate to increase the buff when it swings with other creatures
Similarly, if an effect creates a token that's a copy of a prototyped permanent or causes another permanent to become a copy of it, the copy would have the same characteristics as the prototyped permanent
With that in mind, if a scene existed in both games, we had our choice of showing it as the original game did, how the modern version interpreted it, or a unique fusion of both